pyVIA.plotting_via.plot_population_composition

pyVIA.plotting_via.plot_population_composition(via_object, time_labels=None, celltype_list=None, cmap='rainbow', legend=True, alpha=0.5, linewidth=0.2, n_intervals=20, xlabel='time', ylabel='', title='Cell populations', color_dict=None, fraction=True)[source]
Parameters:

  • via_object – optional. this is required unless both time_labels and cell_labels are provided as arguments to the function

  • time_labels (list) – list length n_cells of pseudotime or known stage numeric labels

  • cell_labels – list of cell type or cluster length n_cells

Returns:

ax